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java.lang.Object | +--org.emboss.jemboss.Jemboss
Java interface to EMBOSS (http://www.emboss.org/) (i) standalone - with a locally installation of EMBOSS. (ii) client / server mode - download the client from a site, such as the HGMP, which runs the Jemboss server.
Nested Class Summary | |
(package private) class |
Jemboss.winExit
Extends WindowAdapter to close window |
Field Summary | |
private javax.swing.ImageIcon |
bwdArrow
|
private javax.swing.JButton |
extend
|
private javax.swing.JFrame |
f
|
private javax.swing.ImageIcon |
fwdArrow
|
private static java.awt.Dimension |
jdim
Jemboss window dimension |
private static java.awt.Dimension |
jdimExtend
|
private javax.swing.JPanel |
p3
|
private javax.swing.JSplitPane |
pmain
|
static PendingResults |
resultsManager
to manage the pending results |
private javax.swing.JScrollPane |
scrollTree
|
static DragTree |
tree
|
(package private) static boolean |
withSoap
true if in client-server mode (using SOAP) |
Constructor Summary | |
Jemboss()
|
Method Summary | |
void |
actionPerformed(java.awt.event.ActionEvent ae)
Action event to open the file manager |
private void |
deleteTmp(java.io.File cwd,
java.lang.String suffix)
Delete temporary files |
static void |
main(java.lang.String[] args)
Launches Jemboss in standalone or client-server mode. |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
private javax.swing.JFrame f
private javax.swing.JSplitPane pmain
private javax.swing.JPanel p3
public static DragTree tree
private javax.swing.JButton extend
private javax.swing.JScrollPane scrollTree
static boolean withSoap
public static PendingResults resultsManager
private static java.awt.Dimension jdim
private static java.awt.Dimension jdimExtend
private javax.swing.ImageIcon fwdArrow
private javax.swing.ImageIcon bwdArrow
Constructor Detail |
public Jemboss()
Method Detail |
public void actionPerformed(java.awt.event.ActionEvent ae)
actionPerformed
in interface java.awt.event.ActionListener
private void deleteTmp(java.io.File cwd, java.lang.String suffix)
public static void main(java.lang.String[] args)
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